SMTL ID : 5vsa.2 (1 other biounit)

Crystal structure of SsoPox AsA1 mutant (C258L-I261F-W263A)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x FE2: FE (II) ION(Non-covalent)

FE2.1: 5 residues within 4Å: Chain A: H.22, H.24, K.137, D.256 Ligands: CO.2 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.22, A:H.24, A:D.256, H2O.1, H2O.7 FE2.5: 6 residues within 4Å: Chain B: H.22, H.24, K.137, D.256 Ligands: CO.6, GOL.8 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.22, B:H.24, B:D.256, H2O.9

2 x CO: COBALT (II) ION(Non-covalent)

CO.2: 5 residues within 4Å: Chain A: K.137, H.170, H.199, R.223 Ligands: FE2.1 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.170, A:H.199, H2O.1, H2O.5 CO.6: 6 residues within 4Å: Chain B: K.137, H.170, H.199, R.223 Ligands: FE2.5, GOL.8 3 PLIP interactions: 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.170, B:H.199, H2O.9

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 8 residues within 4Å: Chain A: P.4, L.5, K.8, D.9, S.10, L.130, N.131, K.132 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:L.5, A:D.9, A:L.130, A:K.132 Water bridges: A:S.10 GOL.4: 6 residues within 4Å: Chain A: N.160, K.164, G.189, V.190, D.191, K.194 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.160, A:K.164, A:G.189, A:D.191 Water bridges: A:G.189 GOL.7: 6 residues within 4Å: Chain B: N.160, K.164, G.189, V.190, D.191, K.194 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:N.160, B:N.160, B:K.164, B:D.191 GOL.8: 10 residues within 4Å: Chain B: H.24, Y.97, Y.99, K.137, H.170, R.223, D.256, L.258 Ligands: FE2.5, CO.6 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:Y.97, B:Y.99, B:R.223

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jacquet, P. et al., Rational engineering of a native hyperthermostable lactonase into a broad spectrum phosphotriesterase. Sci Rep (2017)

Release Date

2018-01-10

Peptides

Aryldialkylphosphatase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

Aryldialkylphosphatase

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