SMTL ID : 5vsb.1

Structure of DUB complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

homo-dimer

Ligands

2 x 9QA: 7-chloro-3-{[4-hydroxy-1-(3-phenylpropanoyl)piperidin-4-yl]methyl}quinazolin-4(3H)-one(Non-covalent)

9QA.1: 17 residues within 4Å: Chain A: Y.17, D.88, V.89, Q.90, Q.144, Q.198, L.199, M.200, R.201, F.202, M.203, K.213, H.249, N.253, H.254, Y.258, Y.307 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:M.200, A:R.201, A:F.202, A:F.202, A:K.213, A:K.213, A:H.249, A:Y.307, A:Y.307 Hydrogen bonds: A:V.89, A:Q.90, A:Q.90, A:R.201, A:F.202 pi-Stacking: A:F.202 9QA.2: 19 residues within 4Å: Chain A: K.151, E.155 Chain B: Y.17, M.85, D.88, V.89, Q.90, Q.144, Q.198, L.199, M.200, R.201, F.202, M.203, K.213, H.249, N.253, Y.258, Y.307 16 PLIP interactions: 15 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:V.89, B:M.200, B:F.202, B:F.202, B:K.213, B:H.249, B:Y.307, B:Y.307, B:Y.307 Hydrogen bonds: B:V.89, B:Q.90, B:Q.90, B:R.201, B:F.202 pi-Stacking: B:H.249 pi-Cation interactions: A:K.151

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lamberto, I. et al., Structure-Guided Development of a Potent and Selective Non-covalent Active-Site Inhibitor of USP7. Cell Chem Biol (2017)

Release Date

2017-12-20

Peptides

Ubiquitin carboxyl-terminal hydrolase 7: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Ubiquitin carboxyl-terminal hydrolase 7

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