SMTL ID : 5vvl.1

Cas1-Cas2 bound to full-site mimic with Ni

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.31 Å

Oligo State

hetero-4-2-mer

Ligands

22 x NI: NICKEL (II) ION(Non-covalent)(Non-functional Binders)

NI.1: 4 residues within 4Å: Chain A: H.211, D.224 Chain I: G.17 Chain J: C.58 Ligand excluded by PLIP NI.2: 2 residues within 4Å: Chain A: K.40 Chain H: G.1 Ligand excluded by PLIP NI.3: 3 residues within 4Å: Chain B: E.144, H.211, D.224 Ligand excluded by PLIP NI.4: 2 residues within 4Å: Chain C: D.247 Chain J: A.14 Ligand excluded by PLIP NI.5: 5 residues within 4Å: Chain C: E.144, H.211, D.224 Chain I: A.58 Chain J: G.17 Ligand excluded by PLIP NI.6: 2 residues within 4Å: Chain D: H.211, D.224 Ligand excluded by PLIP NI.7: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP NI.8: 2 residues within 4Å: Chain C: K.40 Chain G: G.1 Ligand excluded by PLIP NI.9: 1 residues within 4Å: Chain I: G.17 Ligand excluded by PLIP NI.10: 4 residues within 4Å: Chain I: G.8, G.9 Ligands: NI.11, NI.12 Ligand excluded by PLIP NI.11: 3 residues within 4Å: Chain I: T.7, G.8 Ligands: NI.10 Ligand excluded by PLIP NI.12: 3 residues within 4Å: Chain I: G.9, T.10 Ligands: NI.10 Ligand excluded by PLIP NI.13: 1 residues within 4Å: Chain I: G.50 Ligand excluded by PLIP NI.14: 2 residues within 4Å: Chain I: G.5, G.6 Ligand excluded by PLIP NI.15: 2 residues within 4Å: Chain A: W.173 Chain I: G.15 Ligand excluded by PLIP NI.16: 1 residues within 4Å: Chain J: G.17 Ligand excluded by PLIP NI.17: 2 residues within 4Å: Chain J: C.5, T.6 Ligand excluded by PLIP NI.18: 2 residues within 4Å: Chain J: G.9 Ligands: NI.19 Ligand excluded by PLIP NI.19: 3 residues within 4Å: Chain J: G.8, G.9 Ligands: NI.18 Ligand excluded by PLIP NI.20: 2 residues within 4Å: Chain J: G.7, G.8 Ligand excluded by PLIP NI.21: 1 residues within 4Å: Chain J: G.50 Ligand excluded by PLIP NI.22: 2 residues within 4Å: Chain C: P.170 Chain J: G.15 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wright, A.V. et al., Structures of the CRISPR genome integration complex. Science (2017)

Release Date

2017-08-02

Peptides

CRISPR-associated endonuclease Cas1: ABCD
CRISPR-associated endoribonuclease Cas2: EF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

CRISPR-associated endonuclease Cas1

CRISPR-associated endoribonuclease Cas2

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