SMTL ID : 5vvm.2 (1 other biounit)

Crystal structure of human CDH23 EC21-23

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.54 Å

Oligo State

monomer

Ligands

6 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: E.18, N.80, E.82, D.121, N.122 Ligands: CA.2 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.18, A:E.82, A:D.121, A:D.121 CA.2: 7 residues within 4Å: Chain A: E.18, E.82, D.118, V.119, D.121, D.157 Ligands: CA.1 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.18, A:E.82, A:V.119, A:D.121, A:D.157 CA.3: 6 residues within 4Å: Chain A: N.120, N.122, D.155, D.157, N.161, D.209 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:N.122, A:D.155, A:D.157, A:N.161, A:D.209 CA.4: 5 residues within 4Å: Chain A: E.140, D.194, E.196, D.230, N.231 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.140, A:D.194, A:E.196, A:D.230 CA.5: 6 residues within 4Å: Chain A: E.140, E.196, D.227, I.228, D.230, D.263 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.140, A:E.196, A:D.227, A:I.228, A:D.230 CA.6: 6 residues within 4Å: Chain A: N.229, N.231, D.261, D.263, F.267, D.312 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:N.231, A:D.261, A:D.263, A:F.267, A:D.312

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jaiganesh, A. et al., Zooming in on Cadherin-23: Structural Diversity and Potential Mechanisms of Inherited Deafness. Structure (2018)

Release Date

2018-05-23

Peptides

Cadherin-23: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Cadherin-23

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