- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.75 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 14 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 4 residues within 4Å:- Chain A: T.91, H.92, Q.93, K.316
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:Q.93
- Salt bridges: A:H.92, A:K.316
SO4.3: 4 residues within 4Å:- Chain A: P.310, E.311, R.312, K.405
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:E.311, A:R.312
- Salt bridges: A:K.405
SO4.5: 5 residues within 4Å:- Chain A: Y.165, W.318, Y.320, R.330
- Ligands: NDP.4
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:Y.165, A:Y.320
- Salt bridges: A:R.330
SO4.7: 2 residues within 4Å:- Chain B: K.73, R.499
1 PLIP interactions:1 interactions with chain B- Salt bridges: B:R.499
SO4.9: 3 residues within 4Å:- Chain B: H.92, Q.93, K.316
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:Q.93
- Salt bridges: B:H.92, B:K.316
SO4.10: 3 residues within 4Å:- Chain B: N.386, T.389, D.393
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:N.386, B:T.389
SO4.11: 5 residues within 4Å:- Chain B: Y.165, W.318, Y.320, R.330
- Ligands: NDP.8
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:Y.320
- Salt bridges: B:R.330
SO4.14: 2 residues within 4Å:- Chain C: P.117, K.118
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:K.118
SO4.15: 4 residues within 4Å:- Chain C: T.91, H.92, Q.93, I.95
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:Q.93
- Salt bridges: C:H.92
SO4.16: 4 residues within 4Å:- Chain C: P.310, E.311, R.312, K.405
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:E.311, C:R.312
- Salt bridges: C:R.312, C:K.405
SO4.17: 5 residues within 4Å:- Chain C: Y.422, R.450, Y.456, N.460
- Ligands: FAD.12
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:Y.456
- Salt bridges: C:R.450
SO4.19: 2 residues within 4Å:- Chain D: P.117, K.118
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:K.118, D:E.119
SO4.20: 3 residues within 4Å:- Chain D: P.310, E.311, R.312
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:E.311, D:R.312
- Salt bridges: D:R.312
SO4.22: 5 residues within 4Å:- Chain D: Y.422, R.450, Y.456, N.460
- Ligands: FAD.18
1 PLIP interactions:1 interactions with chain D- Salt bridges: D:R.450
- 4 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
NDP.4: 16 residues within 4Å:- Chain A: I.68, F.69, H.71, R.94, S.96, Y.107, Y.320, R.330, Y.422, R.450, Y.456, G.459, N.460, H.463
- Ligands: FAD.1, SO4.5
17 PLIP interactions:17 interactions with chain A- Hydrophobic interactions: A:Y.456, A:N.460
- Hydrogen bonds: A:S.96, A:Y.107, A:Y.107, A:Y.320, A:R.330, A:R.330, A:Y.422, A:R.450, A:R.450, A:Y.456, A:N.460
- Salt bridges: A:H.71, A:H.71, A:H.463
- pi-Stacking: A:Y.107
NDP.8: 16 residues within 4Å:- Chain B: I.68, F.69, H.71, R.94, S.96, Y.107, Y.320, R.330, Y.422, R.450, Y.456, G.459, N.460, H.463
- Ligands: FAD.6, SO4.11
17 PLIP interactions:17 interactions with chain B- Hydrophobic interactions: B:Y.456, B:N.460
- Hydrogen bonds: B:S.96, B:S.96, B:Y.320, B:R.330, B:R.330, B:Y.422, B:Y.422, B:R.450, B:R.450, B:Y.456, B:N.460
- Salt bridges: B:H.71, B:H.71, B:H.463
- pi-Stacking: B:Y.107
NDP.13: 10 residues within 4Å:- Chain C: F.69, H.71, R.94, S.96, Y.107, N.206, W.318, Y.320, N.460, H.463
7 PLIP interactions:7 interactions with chain C- Hydrogen bonds: C:R.94, C:S.96, C:S.96, C:N.206, C:N.460
- Salt bridges: C:H.71, C:H.71
NDP.21: 10 residues within 4Å:- Chain D: F.69, H.71, R.94, S.96, Y.107, N.206, W.318, Y.320, N.460, H.463
8 PLIP interactions:8 interactions with chain D- Hydrogen bonds: D:S.96, D:S.96, D:N.206, D:Y.320, D:N.460
- Salt bridges: D:H.71, D:H.71, D:H.463
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Dhatwalia, R. et al., Identification of the NAD(P)H binding site of eukaryotic UDP-galactopyranose mutase. J. Am. Chem. Soc. (2012)
- Release Date
- 2017-05-31
- Peptides
- UDP-galactopyranose mutase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.75 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 14 x SO4: SULFATE ION(Non-functional Binders)
- 4 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Dhatwalia, R. et al., Identification of the NAD(P)H binding site of eukaryotic UDP-galactopyranose mutase. J. Am. Chem. Soc. (2012)
- Release Date
- 2017-05-31
- Peptides
- UDP-galactopyranose mutase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D