SMTL ID : 5vxh.1

Crystal structure of Xanthomonas campestris OleA E117D

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.84 Å

Oligo State

homo-dimer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 8 residues within 4Å: Chain A: M.21, L.22, F.23, D.151, G.226, G.227 Chain B: R.159, E.161 6 PLIP interactions: 3 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:M.21, A:D.151, A:G.227, B:R.159, B:E.161 Water bridges: B:E.161 GOL.2: 6 residues within 4Å: Chain A: S.19, M.21, L.22, Q.24, E.158 Chain B: R.159 5 PLIP interactions: 4 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:S.19, A:M.21, A:L.22, A:Q.24, B:R.159 GOL.3: 7 residues within 4Å: Chain A: N.46, Q.50, Y.53, I.58, K.59, T.60, D.61 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.50, A:Q.50, A:I.58 Water bridges: A:D.54 GOL.5: 11 residues within 4Å: Chain A: M.135 Chain B: I.147, N.148, D.151, Y.224, G.227, V.228, T.229, S.352, M.353, A.354 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:N.148, B:T.229, B:M.353, B:M.353 Water bridges: B:D.151

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.4: 3 residues within 4Å: Chain A: R.48, E.178, E.182 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.178, A:E.182 Salt bridges: A:R.48

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jensen, M.R. et al., OleA Glu117 is key to condensation of two fatty-acyl coenzyme A substrates in long-chain olefin biosynthesis. Biochem. J. (2017)

Release Date

2017-10-25

Peptides

3-oxoacyl-[ACP] synthase III: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

3-oxoacyl-[ACP] synthase III

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