SMTL ID : 5w0t.1

Crystal structure of monomeric Msp1 from S. cerevisiae

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.63 Å

Oligo State

homo-dimer

Ligands

10 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 4 residues within 4Å: Chain A: Y.83, I.189, R.203, S.247 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.83, A:Y.83, A:R.203, A:S.247 EDO.2: 6 residues within 4Å: Chain A: R.188, I.189, N.190, D.191, I.217, L.221 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.190, A:N.190, A:I.217 EDO.3: 3 residues within 4Å: Chain A: E.263, K.266, Q.267 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.266 EDO.4: 8 residues within 4Å: Chain A: Y.83, G.84, P.85, N.187, P.209, I.217, S.245, G.246 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.246 EDO.5: 6 residues within 4Å: Chain A: P.86, G.87, C.88, G.89, K.90, N.187 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.87, A:C.88, A:G.89, A:K.90, A:N.187 EDO.6: 4 residues within 4Å: Chain B: Y.83, I.189, R.203, S.247 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:Y.83, B:R.203, B:S.247 EDO.7: 6 residues within 4Å: Chain B: R.188, I.189, N.190, D.191, I.217, L.221 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:N.190, B:N.190, B:I.217 EDO.8: 3 residues within 4Å: Chain B: E.263, K.266, Q.267 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:K.266 EDO.9: 8 residues within 4Å: Chain B: Y.83, G.84, P.85, N.187, P.209, I.217, S.245, G.246 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:G.246 EDO.10: 6 residues within 4Å: Chain B: P.86, G.87, C.88, G.89, K.90, N.187 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:G.87, B:C.88, B:G.89, B:K.90, B:N.187

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wohlever, M.L. et al., Msp1 Is a Membrane Protein Dislocase for Tail-Anchored Proteins. Mol. Cell (2017)

Release Date

2017-08-02

Peptides

Protein MSP1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Protein MSP1