SMTL ID : 5w3r.1

SH2B1 SH2 Domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.39 Å

Oligo State

monomer

Ligands

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 8 residues within 4Å: Chain A: R.20, R.41, S.43, E.44, T.45, R.46, V.51, R.64 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:S.43, A:S.43, A:E.44, A:T.45, A:T.45 Water bridges: A:E.44 Salt bridges: A:R.20, A:R.41, A:R.64

3 x IPH: PHENOL(Non-covalent)

IPH.2: 8 residues within 4Å: Chain A: G.48, E.49, Y.50, L.65, S.66, L.67, C.73, I.83 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Y.50, A:Y.50, A:L.67, A:L.67 IPH.3: 9 residues within 4Å: Chain A: W.13, F.38, L.87, E.88, R.91, L.107, V.108, S.109, Y.110 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:R.91, A:Y.110 pi-Stacking: A:F.38 IPH.4: 11 residues within 4Å: Chain A: F.54, F.56, K.61, L.63, Q.76, I.95, P.96, L.97, E.98, S.103, V.105 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:K.61, A:I.95, A:L.97 pi-Stacking: A:F.54, A:F.56

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

McKercher, M.A. et al., Diversity in peptide recognition by the SH2 domain of SH2B1. Proteins (2018)

Release Date

2017-11-22

Peptides

SH2B adapter protein 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

SH2B adapter protein 1