SMTL ID : 5w3x.1 (1 other biounit)

Crystal structure of PopP2 in complex with IP6, AcCoA and the WRKY domain of RRS1-R .

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

1 x IHP: INOSITOL HEXAKISPHOSPHATE(Non-covalent)

IHP.1: 13 residues within 4Å: Chain A: R.72, S.191, L.194, K.195, R.244, K.247, H.248, N.271, K.272, R.273, R.280, K.317, R.324 30 PLIP interactions: 30 interactions with chain A Hydrogen bonds: A:R.72, A:S.191, A:N.271, A:K.272, A:R.280 Water bridges: A:R.72, A:R.72, A:K.195, A:K.195, A:R.244, A:R.244, A:H.248, A:R.283, A:K.317, A:K.317, A:R.324 Salt bridges: A:K.195, A:K.195, A:K.195, A:R.244, A:K.247, A:K.247, A:H.248, A:K.272, A:K.272, A:K.272, A:R.280, A:K.317, A:K.317, A:R.324

1 x ACO: ACETYL COENZYME *A(Non-covalent)

ACO.2: 10 residues within 4Å: Chain A: K.180, S.181, A.251, A.252, S.253, D.295, S.296, I.308, T.309, F.310 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:S.253, A:S.253, A:S.253, A:S.296, A:S.296, A:T.309 Water bridges: A:K.180, A:A.252, A:A.252, A:K.306, A:K.306 Salt bridges: A:K.180, A:K.306

1 x ZN: ZINC ION(Non-covalent)

ZN.3: 4 residues within 4Å: Chain B: C.42, C.50, H.74, H.76 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.42, B:C.50, B:H.74, B:H.76

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Z.M. et al., Mechanism of host substrate acetylation by a YopJ family effector. Nat Plants (2017)

Release Date

2017-08-09

Peptides

PopP2 protein: A
Disease resistance protein RRS1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

PopP2 protein

Disease resistance protein RRS1

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