- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.76 Å
- Oligo State
- homo-tetramer
- Ligands
- 15 x SO4: SULFATE ION(Non-functional Binders)
- 11 x GOL: GLYCEROL(Non-functional Binders)
GOL.5: 6 residues within 4Å:- Chain A: T.105, G.202, Y.204, D.227, F.228, G.229
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:Y.204, A:D.227, A:F.228, A:G.229
- Water bridges: A:G.202, A:D.227
GOL.10: 6 residues within 4Å:- Chain B: L.50, I.54, R.55, F.79, E.85
- Chain D: E.85
6 PLIP interactions:2 interactions with chain B, 4 interactions with chain D- Hydrogen bonds: B:I.54, D:E.85, D:E.85
- Water bridges: B:E.85, D:R.83, D:E.85
GOL.11: 6 residues within 4Å:- Chain B: T.105, G.202, Y.204, D.227, F.228, G.229
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:T.105, B:F.228, B:G.229
GOL.12: 5 residues within 4Å:- Chain B: R.17, G.18, S.19, R.20, G.266
8 PLIP interactions:8 interactions with chain B- Hydrogen bonds: B:G.18, B:S.19, B:S.19, B:R.20, B:R.20, B:G.266
- Water bridges: B:R.17, B:R.17
GOL.17: 3 residues within 4Å:- Chain C: D.280, V.281, V.282
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:V.281, C:V.282
- Water bridges: C:D.280, C:D.280
GOL.18: 4 residues within 4Å:- Chain C: R.17, G.18, S.19, R.20
8 PLIP interactions:8 interactions with chain C- Hydrogen bonds: C:R.17, C:G.18, C:S.19, C:S.19, C:R.20, C:R.20, C:R.20
- Water bridges: C:L.21
GOL.19: 6 residues within 4Å:- Chain C: T.105, G.202, Y.204, D.227, F.228, G.229
7 PLIP interactions:7 interactions with chain C- Hydrogen bonds: C:T.105, C:T.105, C:Y.204, C:F.228, C:G.229, C:K.230
- Water bridges: C:Y.204
GOL.20: 2 residues within 4Å:- Chain C: R.313, R.363
5 PLIP interactions:5 interactions with chain C- Hydrogen bonds: C:R.313, C:R.313, C:R.363, C:R.363
- Water bridges: C:H.308
GOL.25: 3 residues within 4Å:- Chain D: D.280, V.281, V.282
4 PLIP interactions:4 interactions with chain D- Hydrogen bonds: D:D.280, D:D.280, D:V.281, D:V.282
GOL.26: 5 residues within 4Å:- Chain C: K.305, I.327
- Chain D: P.283, D.286, Y.288
1 PLIP interactions:1 interactions with chain D- Water bridges: D:I.287
GOL.27: 5 residues within 4Å:- Chain D: T.105, G.202, Y.204, F.228, G.229
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:Y.204, D:F.228, D:G.229
- 2 x 9X7: ethyl 2-oxopropanoate(Non-covalent)
9X7.6: 15 residues within 4Å:- Chain A: K.38, T.301, P.302, P.303, A.304, V.322, S.323, G.324
- Chain B: K.38, P.302, P.303, A.304, V.322, S.323, G.324
7 PLIP interactions:3 interactions with chain B, 4 interactions with chain A- Hydrophobic interactions: B:A.304
- Hydrogen bonds: B:A.304, A:K.38, A:A.304, A:G.324
- Salt bridges: B:K.38, A:K.38
9X7.28: 14 residues within 4Å:- Chain C: K.38, T.301, P.302, P.303, V.322, S.323, G.324
- Chain D: K.38, P.302, P.303, A.304, V.322, S.323, G.324
7 PLIP interactions:4 interactions with chain D, 3 interactions with chain C- Hydrophobic interactions: D:A.304
- Hydrogen bonds: D:A.304, D:G.324, C:K.38, C:G.324
- Salt bridges: D:K.38, C:K.38
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hill, B.L. et al., Structural analysis reveals a pyruvate-binding activator site in theAgrobacterium tumefaciensADP-glucose pyrophosphorylase. J. Biol. Chem. (2019)
- Release Date
- 2018-11-14
- Peptides
- Glucose-1-phosphate adenylyltransferase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.76 Å
- Oligo State
- homo-tetramer
- Ligands
- 15 x SO4: SULFATE ION(Non-functional Binders)
- 11 x GOL: GLYCEROL(Non-functional Binders)
- 2 x 9X7: ethyl 2-oxopropanoate(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hill, B.L. et al., Structural analysis reveals a pyruvate-binding activator site in theAgrobacterium tumefaciensADP-glucose pyrophosphorylase. J. Biol. Chem. (2019)
- Release Date
- 2018-11-14
- Peptides
- Glucose-1-phosphate adenylyltransferase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D