SMTL ID : 5w63.2 (1 other biounit)

Crystal structure of channel catfish BAX

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.44 Å

Oligo State

homo-dimer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: R.96, Y.142, E.145, H.146 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.145 Salt bridges: A:R.96, A:H.146 SO4.2: 4 residues within 4Å: Chain A: G.159, I.160, Q.161, T.162 8 PLIP interactions: 7 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:G.159, A:G.159, A:I.160, A:Q.161, A:T.162, A:T.162, B:Q.64 Water bridges: A:Q.161 SO4.3: 3 residues within 4Å: Chain A: S.41, R.42, H.43 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.42, A:H.43 Water bridges: A:R.42, A:R.42 SO4.8: 4 residues within 4Å: Chain B: R.96, Y.142, E.145, H.146 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:E.145 Salt bridges: B:R.96, B:H.146 SO4.9: 4 residues within 4Å: Chain B: G.159, I.160, Q.161, T.162 7 PLIP interactions: 6 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:G.159, B:G.159, B:I.160, B:Q.161, B:T.162, A:Q.64 Water bridges: B:Q.161 SO4.10: 3 residues within 4Å: Chain B: S.41, R.42, H.43 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:R.42, B:H.43 Water bridges: B:R.42, B:R.42

8 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 3 residues within 4Å: Chain A: N.105, R.108 Chain B: F.175 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.105, A:R.108, A:R.108 EDO.5: 1 residues within 4Å: Chain A: S.100 No protein-ligand interaction detected (PLIP) EDO.6: 2 residues within 4Å: Chain A: N.71, V.73 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.71, A:V.73 EDO.7: 1 residues within 4Å: Chain A: D.130 No protein-ligand interaction detected (PLIP) EDO.11: 3 residues within 4Å: Chain A: F.175 Chain B: N.105, R.108 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:N.105, B:R.108, B:R.108 Water bridges: B:Y.163 EDO.12: 1 residues within 4Å: Chain B: S.100 No protein-ligand interaction detected (PLIP) EDO.13: 2 residues within 4Å: Chain B: N.71, V.73 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.71, B:V.73 EDO.14: 1 residues within 4Å: Chain B: D.130 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Robin, A.Y. et al., Ensemble Properties of Bax Determine Its Function. Structure (2018)

Release Date

2018-06-27

Peptides

Apoptosis regulator bax: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Apoptosis regulator bax

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