SMTL ID : 5w8s.1

Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

4 x NA: SODIUM ION(Non-functional Binders)

NA.1: 5 residues within 4Å: Chain A: R.129, E.326, L.327, L.328, E.331 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.129, A:E.326, A:L.328, A:E.331 NA.2: 4 residues within 4Å: Chain A: P.188, A.191, D.225, E.227 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.227, A:E.227 NA.4: 5 residues within 4Å: Chain B: R.129, E.326, L.327, L.328, E.331 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:R.129, B:L.328, B:L.328 NA.5: 4 residues within 4Å: Chain B: P.188, A.191, D.225, E.227 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.227

2 x LI: LITHIUM ION(Non-covalent)

LI.3: 2 residues within 4Å: Chain A: C.367 Chain B: F.163 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:C.367 LI.6: 2 residues within 4Å: Chain A: F.163 Chain B: C.367 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:C.367

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bohl, T.E. et al., Crystal structure of lipid A disaccharide synthase LpxB from Escherichia coli. Nat Commun (2018)

Release Date

2018-01-31

Peptides

Lipid-A-disaccharide synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Lipid-A-disaccharide synthase

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