SMTL ID : 5wci.1

Human MYST histone acetyltransferase 1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.78 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.56, C.59, H.72, C.76 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.56, A:C.59, A:H.72, A:C.76

1 x 1VU: propionyl Coenzyme A(Non-covalent)

1VU.2: 26 residues within 4Å: Chain A: W.38, F.116, L.117, V.160, A.161, C.162, I.163, L.164, T.165, Q.170, R.171, R.172, G.173, Y.174, G.175, K.176, P.195, E.196, P.198, L.199, S.200, L.202, G.203, L.205, S.206, S.209 27 PLIP interactions: 27 interactions with chain A Hydrophobic interactions: A:L.117, A:V.160, A:L.164, A:P.195, A:L.199, A:L.202 Hydrogen bonds: A:I.163, A:I.163, A:T.165, A:T.165, A:Q.170, A:R.171, A:R.171, A:R.171, A:R.172, A:G.173, A:Y.174, A:G.175, A:K.176, A:S.200, A:S.209, A:Q.276 Water bridges: A:Q.170, A:R.171 Salt bridges: A:K.176 pi-Cation interactions: A:R.171, A:R.171

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 2 residues within 4Å: Chain A: I.35, D.36 Ligand excluded by PLIP

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 5 residues within 4Å: Chain A: V.130, Y.132, K.150, K.152, W.291 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.132, A:K.150 EDO.5: 3 residues within 4Å: Chain A: Y.65, E.66, K.67 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.66, A:K.67 EDO.6: 6 residues within 4Å: Chain A: Y.62, I.104, Q.107, N.108, L.111, Y.123 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:I.104, A:Q.107 EDO.7: 2 residues within 4Å: Chain A: R.88, V.137 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.88, A:R.88

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zeng, H. et al., Human MYST histone acetyltransferase 1. to be published

Release Date

2017-07-26

Peptides

Histone acetyltransferase KAT8: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Histone acetyltransferase KAT8

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