SMTL ID : 5wcn.1 (1 other biounit)

Structure of a bacterial polysialyltransferase in complex with CDP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: K.95, K.99 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:K.95, A:K.99

1 x CDP: CYTIDINE-5'-DIPHOSPHATE(Non-covalent)

CDP.2: 12 residues within 4Å: Chain A: C.237, A.238, K.270, L.271, H.272, P.273, P.302, A.303, E.304, S.320, T.321, S.322 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:A.238, A:A.303, A:E.304, A:T.321, A:S.322 Salt bridges: A:H.272 pi-Cation interactions: A:H.272

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lizak, C. et al., X-ray crystallographic structure of a bacterial polysialyltransferase provides insight into the biosynthesis of capsular polysialic acid. Sci Rep (2017)

Release Date

2017-08-02

Peptides

SiaD: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
M

SiaD

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