SMTL ID : 5wcr.1

Phosphotriesterase variant R0deltaL7

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

homo-dimer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: H.23, H.25, K.137, D.260 Ligands: ZN.2, CAC.3 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.23, A:H.25, A:D.260 ZN.2: 6 residues within 4Å: Chain A: W.99, K.137, H.169, H.198 Ligands: ZN.1, CAC.3 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.169, A:H.198 ZN.6: 6 residues within 4Å: Chain B: H.23, H.25, K.137, D.260 Ligands: ZN.7, CAC.8 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:H.23, B:H.25, B:D.260 ZN.7: 6 residues within 4Å: Chain B: W.99, K.137, H.169, H.198 Ligands: ZN.6, CAC.8 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:H.169, B:H.198

2 x CAC: CACODYLATE ION(Non-covalent)

CAC.3: 10 residues within 4Å: Chain A: H.23, H.25, L.74, W.99, K.137, H.169, H.198, D.260 Ligands: ZN.1, ZN.2 No protein-ligand interaction detected (PLIP) CAC.8: 10 residues within 4Å: Chain B: H.23, H.25, L.74, W.99, K.137, H.169, H.198, D.260 Ligands: ZN.6, ZN.7 No protein-ligand interaction detected (PLIP)

2 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.4: 5 residues within 4Å: Chain A: R.9, G.10, T.129, G.130, I.131 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.129 Water bridges: A:R.132 MPD.5: 3 residues within 4Å: Chain A: Q.302, A.306, T.309 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.309, A:T.309

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Miton, C.M. et al., Phosphotriesterase variant R0deltaL7. To Be Published

Release Date

2019-01-23

Peptides

Phosphotriesterase variant PTE-R0: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
G

Phosphotriesterase variant PTE-R0