SMTL ID : 5wen.1

GluA2 bound to GSG1L in digitonin, state 2

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

homo-tetramer

Ligands

2 x AJP: Digitonin(Covalent)

AJP.1: 16 residues within 4Å: Chain A: Y.118, Y.119, Q.120, K.207, G.208, Y.209, H.210, E.232, M.371, L.373, V.459, Y.460, G.461, P.728, S.731, S.732 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:K.207, A:Y.460, A:Y.460 Hydrogen bonds: A:S.732 AJP.2: 16 residues within 4Å: Chain C: Y.118, Y.119, Q.120, K.207, G.208, Y.209, H.210, E.232, M.371, L.373, V.459, Y.460, G.461, P.728, S.731, S.732 6 PLIP interactions: 6 interactions with chain C Hydrophobic interactions: C:K.207, C:Y.460, C:Y.460, C:Y.460, C:Y.460 Hydrogen bonds: C:S.732

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Twomey, E.C. et al., Channel opening and gating mechanism in AMPA-subtype glutamate receptors. Nature (2017)

Release Date

2017-08-02

Peptides

Glutamate receptor 2,Germ cell-specific gene 1-like protein: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Membrane

We predict this structure to be a membrane protein.
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Glutamate receptor 2,Germ cell-specific gene 1-like protein

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