- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.97 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 8 x CD: CADMIUM ION(Non-covalent)
CD.2: 1 residues within 4Å:- Chain A: E.11
3 PLIP interactions:2 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:E.11, A:E.11, H2O.17
CD.3: 2 residues within 4Å:- Chain A: H.531, E.548
4 PLIP interactions:3 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:H.531, A:E.548, A:E.548, H2O.19
CD.4: 2 residues within 4Å:- Chain A: D.543, D.547
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:D.543, A:D.543, A:D.547, A:D.547
CD.5: 2 residues within 4Å:- Chain A: C.112, C.128
2 PLIP interactions:2 interactions with chain A- Metal complexes: A:C.112, A:C.128
CD.21: 1 residues within 4Å:- Chain B: E.11
3 PLIP interactions:2 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:E.11, B:E.11, H2O.38
CD.22: 2 residues within 4Å:- Chain B: H.531, E.548
4 PLIP interactions:3 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:H.531, B:E.548, B:E.548, H2O.39
CD.23: 2 residues within 4Å:- Chain B: D.543, D.547
4 PLIP interactions:4 interactions with chain B- Metal complexes: B:D.543, B:D.543, B:D.547, B:D.547
CD.24: 2 residues within 4Å:- Chain B: C.112, C.128
2 PLIP interactions:2 interactions with chain B- Metal complexes: B:C.112, B:C.128
- 2 x ZN: ZINC ION(Non-covalent)
ZN.6: 4 residues within 4Å:- Chain A: C.597, C.600, C.613, C.616
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:C.597, A:C.600, A:C.613, A:C.616
ZN.25: 4 residues within 4Å:- Chain B: C.597, C.600, C.613, C.616
4 PLIP interactions:4 interactions with chain B- Metal complexes: B:C.597, B:C.600, B:C.613, B:C.616
- 20 x SO4: SULFATE ION(Non-functional Binders)
SO4.7: 5 residues within 4Å:- Chain A: N.229, N.326, Y.330, K.345, K.380
Ligand excluded by PLIPSO4.8: 3 residues within 4Å:- Chain A: P.238, K.239, D.240
Ligand excluded by PLIPSO4.9: 2 residues within 4Å:- Chain A: R.220, R.222
Ligand excluded by PLIPSO4.10: 6 residues within 4Å:- Chain A: P.301, S.302, E.305, K.612, C.616, G.617
Ligand excluded by PLIPSO4.11: 4 residues within 4Å:- Chain A: T.30, P.35, D.36, E.37
Ligand excluded by PLIPSO4.12: 2 residues within 4Å:- Chain A: R.607, N.646
Ligand excluded by PLIPSO4.13: 2 residues within 4Å:- Chain A: R.340, E.341
Ligand excluded by PLIPSO4.14: 4 residues within 4Å:- Chain A: H.507, K.511
- Chain B: P.437
- Ligands: MB5.19
Ligand excluded by PLIPSO4.15: 3 residues within 4Å:- Chain A: R.340, E.367, N.368
Ligand excluded by PLIPSO4.16: 2 residues within 4Å:- Chain A: R.209, R.379
Ligand excluded by PLIPSO4.26: 5 residues within 4Å:- Chain B: N.229, N.326, Y.330, K.345, K.380
Ligand excluded by PLIPSO4.27: 3 residues within 4Å:- Chain B: P.238, K.239, D.240
Ligand excluded by PLIPSO4.28: 2 residues within 4Å:- Chain B: R.220, R.222
Ligand excluded by PLIPSO4.29: 6 residues within 4Å:- Chain B: P.301, S.302, E.305, K.612, C.616, G.617
Ligand excluded by PLIPSO4.30: 4 residues within 4Å:- Chain B: T.30, P.35, D.36, E.37
Ligand excluded by PLIPSO4.31: 2 residues within 4Å:- Chain B: R.607, N.646
Ligand excluded by PLIPSO4.32: 2 residues within 4Å:- Chain B: R.340, E.341
Ligand excluded by PLIPSO4.33: 4 residues within 4Å:- Chain A: P.437
- Chain B: H.507, K.511
- Ligands: MB5.38
Ligand excluded by PLIPSO4.34: 3 residues within 4Å:- Chain B: R.340, E.367, N.368
Ligand excluded by PLIPSO4.35: 2 residues within 4Å:- Chain B: R.209, R.379
Ligand excluded by PLIP- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 4 x MB5: (5aS,12aS,13aS)-9-chloro-12,12-dimethyl-2,3,11,12,12a,13-hexahydro-1H,5H,6H-5a,13a-(epiminomethano)indolizino[7,6-b]carbazol-14-one(Non-covalent)
MB5.18: 15 residues within 4Å:- Chain A: P.85, V.130, G.131, A.132, P.133, V.136, L.137, F.489, I.493, E.494, W.514, L.568, I.573, L.641, W.645
9 PLIP interactions:9 interactions with chain A- Hydrophobic interactions: A:P.85, A:L.137, A:F.489, A:I.493, A:I.493, A:I.573, A:L.641
- Hydrogen bonds: A:G.131, A:E.494
MB5.19: 14 residues within 4Å:- Chain A: W.421, H.507, I.510, P.653, E.656
- Chain B: G.179, Q.180, G.433, K.434, S.435, A.436, P.437, A.438
- Ligands: SO4.14
5 PLIP interactions:3 interactions with chain A, 2 interactions with chain B- Salt bridges: A:E.656
- pi-Stacking: A:H.507, A:H.507
- Hydrogen bonds: B:Q.180, B:G.433
MB5.37: 15 residues within 4Å:- Chain B: P.85, V.130, G.131, A.132, P.133, V.136, L.137, F.489, I.493, E.494, W.514, L.568, I.573, L.641, W.645
9 PLIP interactions:9 interactions with chain B- Hydrophobic interactions: B:P.85, B:L.137, B:F.489, B:I.493, B:I.493, B:I.573, B:L.641
- Hydrogen bonds: B:G.131, B:E.494
MB5.38: 14 residues within 4Å:- Chain A: G.179, Q.180, G.433, K.434, S.435, A.436, P.437, A.438
- Chain B: W.421, H.507, I.510, P.653, E.656
- Ligands: SO4.33
5 PLIP interactions:3 interactions with chain B, 2 interactions with chain A- Salt bridges: B:E.656
- pi-Stacking: B:H.507, B:H.507
- Hydrogen bonds: A:Q.180, A:G.433
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Fraley, A.E. et al., Function and Structure of MalA/MalA', Iterative Halogenases for Late-Stage C-H Functionalization of Indole Alkaloids. J. Am. Chem. Soc. (2017)
- Release Date
- 2017-08-16
- Peptides
- Flavin-dependent halogenase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.97 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 8 x CD: CADMIUM ION(Non-covalent)
- 2 x ZN: ZINC ION(Non-covalent)
- 20 x SO4: SULFATE ION(Non-functional Binders)
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 4 x MB5: (5aS,12aS,13aS)-9-chloro-12,12-dimethyl-2,3,11,12,12a,13-hexahydro-1H,5H,6H-5a,13a-(epiminomethano)indolizino[7,6-b]carbazol-14-one(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Fraley, A.E. et al., Function and Structure of MalA/MalA', Iterative Halogenases for Late-Stage C-H Functionalization of Indole Alkaloids. J. Am. Chem. Soc. (2017)
- Release Date
- 2017-08-16
- Peptides
- Flavin-dependent halogenase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A