SMTL ID : 5wh1.1 (3 other biounits)

Apo form of the C-terminal region of human Transcription Factor IIB

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.39 Å

Oligo State

monomer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: D.177, V.178, R.181 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.177, A:V.178 Salt bridges: A:R.181 SO4.2: 3 residues within 4Å: Chain A: V.178, R.181, R.185 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.181, A:R.185 SO4.3: 4 residues within 4Å: Chain A: Y.154, Q.158, T.165, Q.166 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.154, A:Q.158, A:Q.166, A:Q.166 SO4.4: 2 residues within 4Å: Chain A: H.129, R.132 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:H.129, A:R.132 SO4.5: 5 residues within 4Å: Chain A: H.129, K.133, F.195, P.196, T.197 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.197, A:T.197 Salt bridges: A:H.129, A:K.133

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bratkowski, M. et al., Structural dissection of an interaction between transcription initiation and termination factors implicated in promoter-terminator cross-talk. J. Biol. Chem. (2018)

Release Date

2017-11-29

Peptides

Transcription initiation factor IIB: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Transcription initiation factor IIB

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