SMTL ID : 5wiw.2 (1 other biounit)

Crystal structure of murine 4-1BB N128A mutant from HEK293T cells in P43 space group

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x NAG- NAG- BMA- MAN- FUC: alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-FUC.1: 2 residues within 4Å: Chain A: N.117, L.120 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:L.120

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 2 residues within 4Å: Chain A: T.91, K.92 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.92

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 3 residues within 4Å: Chain A: R.51, F.52, F.55 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:F.52 Salt bridges: A:R.51 SO4.4: 3 residues within 4Å: Chain A: K.127, K.133, V.136 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:K.127, A:K.133

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bitra, A. et al., Crystal structure of murine 4-1BB and its interaction with 4-1BBL support a role for galectin-9 in 4-1BB signaling. J. Biol. Chem. (2018)

Release Date

2017-12-20

Peptides

Tumor necrosis factor receptor superfamily member 9: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Tumor necrosis factor receptor superfamily member 9

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