SMTL ID : 5wo9.1

Crystal Structure of Transient Receptor Potential (TRP) channel TRPV6* in the presence of Calcium

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.70 Å

Oligo State

monomer

Ligands

1 x DTB: 6-(5-METHYL-2-OXO-IMIDAZOLIDIN-4-YL)-HEXANOIC ACID(Covalent)

DTB.1: 8 residues within 4Å: Chain A: R.33, Q.40, L.88, M.110, Y.115, V.151, N.158, L.159 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:Y.115 Hydrogen bonds: A:Q.40, A:Q.118, A:L.159 Salt bridges: A:R.33

3 x CA: CALCIUM ION(Non-covalent)(Non-functional Binders)

CA.2: 1 residues within 4Å: Chain A: D.541 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.541, A:D.541 CA.3: 1 residues within 4Å: Chain A: T.538 No protein-ligand interaction detected (PLIP) CA.4: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Singh, A.K. et al., Swapping of transmembrane domains in the epithelial calcium channel TRPV6. Sci Rep (2017)

Release Date

2017-09-13

Peptides

Transient receptor potential cation channel subfamily V member 6: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Transient receptor potential cation channel subfamily V member 6

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