SMTL ID : 5wp1.1

Complex of ERK2 with 5,7-dihydroxychromone

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

1 x B7S: 5,7-dihydroxy-4H-1-benzopyran-4-one(Non-covalent)

B7S.1: 11 residues within 4Å: Chain A: I.28, V.36, A.49, K.51, I.81, Q.102, D.103, L.104, M.105, L.153, C.163 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:V.36, A:A.49, A:L.153 Hydrogen bonds: A:K.51, A:M.105

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: Y.184, R.188, R.191, Y.230 6 PLIP interactions: 6 interactions with chain A Water bridges: A:E.183, A:R.191, A:Y.230, A:Y.230 Salt bridges: A:R.188, A:R.191

1 x BEZ: BENZOIC ACID(Non-covalent)

BEZ.3: 6 residues within 4Å: Chain A: G.179, F.180, N.254, L.255, K.256, A.257 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:K.256 Hydrogen bonds: A:F.180, A:N.254, A:K.256 pi-Cation interactions: A:K.256

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shin, S.H. et al., Multiple phytochemicals at low doses accumulatively inhibit one key protein in cancers. To Be Published

Release Date

2018-08-08

Peptides

Mitogen-activated protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 1