SMTL ID : 5wry.1 (1 other biounit)

Structure of human PARP1 catalytic domain bound to a quinazoline-2,4(1H,3H)-dione inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x 4YR: N-[(3R)-1-(cyclopropylmethyl)pyrrolidin-3-yl]-5-[(2,4-dioxo-3,4-dihydroquinazolin-1(2H)-yl)methyl]-2-fluorobenzamide(Non-covalent)

4YR.1: 17 residues within 4Å: Chain A: D.107, L.110, D.111, H.203, G.204, R.219, I.220, A.221, Y.230, G.235, I.236, Y.237, F.238, A.239, S.245, Y.248, E.329 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:L.110, A:Y.230, A:Y.237, A:Y.237, A:A.239, A:Y.248, A:E.329 Hydrogen bonds: A:D.107, A:G.204, A:G.204, A:Y.237 Water bridges: A:R.219 Salt bridges: A:D.107, A:D.111 pi-Stacking: A:Y.237, A:Y.248

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cao, R. et al., Structure of human PARP1 catalytic domain bound to a quinazoline-2,4(1H,3H)-dione inhibitor. To Be Published

Release Date

2017-01-25

Peptides

Poly [ADP-ribose] polymerase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Poly [ADP-ribose] polymerase 1

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