SMTL ID : 5wsk.2 (1 other biounit)

Structure of Ribulose-1,5-bisphosphate carboxylase/oxygenase from wheat

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.78 Å

Oligo State

hetero-8-8-mer

Ligands

8 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 5 residues within 4Å: Chain A: T.173, K.177, K.201, D.203, E.204 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.203, A:E.204, H2O.2, H2O.2, H2O.10 MG.2: 5 residues within 4Å: Chain B: T.173, K.177, K.201, D.203, E.204 5 PLIP interactions: 2 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:D.203, B:E.204, H2O.16, H2O.21, H2O.25 MG.3: 5 residues within 4Å: Chain E: T.173, K.177, K.201, D.203, E.204 5 PLIP interactions: 2 interactions with chain E, 3 Ligand-Water interactions Metal complexes: E:D.203, E:E.204, H2O.39, H2O.40, H2O.47 MG.4: 5 residues within 4Å: Chain F: T.173, K.177, K.201, D.203, E.204 5 PLIP interactions: 2 interactions with chain F, 3 Ligand-Water interactions Metal complexes: F:D.203, F:E.204, H2O.53, H2O.58, H2O.62 MG.5: 5 residues within 4Å: Chain I: T.173, K.177, K.201, D.203, E.204 5 PLIP interactions: 2 interactions with chain I, 3 Ligand-Water interactions Metal complexes: I:D.203, I:E.204, H2O.76, H2O.77, H2O.84 MG.6: 5 residues within 4Å: Chain J: T.173, K.177, K.201, D.203, E.204 5 PLIP interactions: 2 interactions with chain J, 3 Ligand-Water interactions Metal complexes: J:D.203, J:E.204, H2O.90, H2O.95, H2O.99 MG.7: 5 residues within 4Å: Chain M: T.173, K.177, K.201, D.203, E.204 5 PLIP interactions: 2 interactions with chain M, 3 Ligand-Water interactions Metal complexes: M:D.203, M:E.204, H2O.114, H2O.114, H2O.121 MG.8: 5 residues within 4Å: Chain N: T.173, K.177, K.201, D.203, E.204 5 PLIP interactions: 2 interactions with chain N, 3 Ligand-Water interactions Metal complexes: N:D.203, N:E.204, H2O.127, H2O.133, H2O.136

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ma, Y. et al., Structure of Ribulose-1,5-bisphosphate carboxylase/oxygenase from wheat. To Be Published

Release Date

2018-02-14

Peptides

Ribulose bisphosphate carboxylase large chain: ABEFIJMN
Ribulose bisphosphate carboxylase small chain: CDGHKLOP

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

E
C

F
D

I
C

J
D

M
C

N
D

C
H

D
G

G
H

H
G

K
H

L
G

O
H

P
G

Ribulose bisphosphate carboxylase large chain

Ribulose bisphosphate carboxylase small chain

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