SMTL ID : 5wtt.2 (1 other biounit)

Structure of the 093G9 Fab in complex with the epitope peptide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-1-1-mer

Ligands

1 x CYS- GLY- LEU- GLU- CYS- ASN- PHE- GLY: Epitope peptide of Cyr61(Non-covalent)

CYS-GLY-LEU-GLU-CYS-ASN-PHE-GLY.1: 19 residues within 4Å: Chain A: S.52, H.54, W.66, Y.69, H.71, N.77, T.118, I.119, G.122, S.123, L.124 Chain B: Y.51, Y.57, G.116, T.117, H.118, F.119, P.120, Q.121 13 PLIP interactions: 5 interactions with chain B, 8 interactions with chain A Hydrophobic interactions: B:Y.51, B:Y.57, A:I.119, A:I.119, A:L.124 Hydrogen bonds: B:Y.51, B:H.118, B:Q.121, A:S.52, A:Y.69, A:Y.69, A:N.77 Water bridges: A:I.119

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhong, C. et al., Molecular basis for the recognition of CCN1 by monoclonal antibody 093G9. J. Mol. Recognit. (2017)

Release Date

2017-12-20

Peptides

Heavy chain of 093G9 Fab: A
Light chain of 093G9 Fab: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Heavy chain of 093G9 Fab

Light chain of 093G9 Fab

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