SMTL ID : 5wuk.1

Crystal structure of EED [G255D] in complex with EZH2 peptide and EED226 compound

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.03 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: K.136, E.163, W.289, Y.290 Ligands: 73K.2 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.136, A:E.163, A:Y.290 Water bridges: A:E.163

1 x 73K: N-(furan-2-ylmethyl)-8-(4-methylsulfonylphenyl)-[1,2,4]triazolo[4,3-c]pyrimidin-5-amine(Non-covalent)

73K.2: 11 residues within 4Å: Chain A: P.20, F.22, Y.73, N.119, K.136, L.165, D.235, Y.290, R.292, R.339 Ligands: GOL.1 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:F.22, A:F.22, A:Y.290, A:R.292 Hydrogen bonds: A:N.119, A:K.136 pi-Stacking: A:Y.73, A:Y.73, A:Y.290, A:Y.290, A:Y.290

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, L. et al., Split luciferase-based biosensors for characterizing EED binders. Anal. Biochem. (2017)

Release Date

2017-05-03

Peptides

Polycomb protein EED: A
Histone-lysine N-methyltransferase EZH2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Polycomb protein EED

Histone-lysine N-methyltransferase EZH2