SMTL ID : 5wvd.1

Structure of Mnk1 in complex with DS12881479

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-dimer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: H.55, S.58, R.59, R.62, E.197 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.58, A:E.197 Salt bridges: A:H.55, A:R.59, A:R.62

2 x 7UX: 1-methyl-N-(5-phenyl-1,3-thiazol-2-yl)piperidine-4-carboxamide(Non-covalent)

7UX.2: 16 residues within 4Å: Chain A: E.22, L.24, V.32, A.45, L.77, F.93, E.94, K.95, L.96, Q.97, G.98, G.99, L.146, C.159, D.160, F.161 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.24, A:V.32, A:V.32, A:L.77, A:F.93, A:L.146, A:F.161, A:F.161 Hydrogen bonds: A:L.96, A:L.96 Salt bridges: A:E.22 7UX.3: 15 residues within 4Å: Chain B: E.22, L.24, V.32, A.45, L.77, F.93, E.94, L.96, Q.97, G.98, G.99, L.146, C.159, D.160, F.161 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:L.24, B:V.32, B:V.32, B:L.77, B:F.93, B:L.146, B:F.161, B:F.161 Hydrogen bonds: B:L.96, B:L.96 Salt bridges: B:E.22

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Matsui, Y. et al., A novel inhibitor stabilizes the inactive conformation of MAPK-interacting kinase 1. Acta Crystallogr F Struct Biol Commun (2018)

Release Date

2018-01-03

Peptides

MAP kinase interacting serine/threonine kinase 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

MAP kinase interacting serine/threonine kinase 1