SMTL ID : 5x17.2 (1 other biounit)

Crystal structure of murine CK1d in complex with ADP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: R.129, K.156, K.173, E.191 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.191 Water bridges: A:R.129 Salt bridges: A:R.129, A:K.156, A:K.173 SO4.2: 5 residues within 4Å: Chain A: R.180, Q.216, G.217, K.226, I.230 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.217 Salt bridges: A:R.180, A:K.226 SO4.3: 4 residues within 4Å: Chain A: S.269, R.272, Q.273, R.276 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.272, A:Q.273 Salt bridges: A:R.276 SO4.4: 3 residues within 4Å: Chain A: R.159, R.194, K.265 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.159, A:R.194 SO4.5: 4 residues within 4Å: Chain A: K.105, G.283, F.284, S.285 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.285 Salt bridges: A:K.105

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.6: 16 residues within 4Å: Chain A: I.17, G.18, S.19, G.20, I.25, A.38, K.40, E.54, Y.58, E.85, L.86, L.87, D.134, L.137, I.150, D.151 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:G.20, A:Y.58, A:E.85, A:L.87, A:D.151, A:D.151 Water bridges: A:S.19, A:F.22, A:K.40, A:S.90, A:S.90, A:D.93, A:D.134, A:N.135 Salt bridges: A:K.40, A:K.40

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shinohara, Y. et al., Temperature-Sensitive Substrate and Product Binding Underlie Temperature-Compensated Phosphorylation in the Clock. Mol. Cell (2017)

Release Date

2017-10-04

Peptides

Casein kinase I isoform delta: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Casein kinase I isoform delta

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