SMTL ID : 5x3r.1 (1 other biounit)

Crystal structure of the SmcR complexed with QStatin

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x 7Y3: 1-(5-bromanylthiophen-2-yl)sulfonylpyrazole(Non-covalent)

7Y3.1: 12 residues within 4Å: Chain A: F.75, W.114, F.129, N.133, N.136, Q.137, V.140, A.163, N.164, F.166, H.167, C.170 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:V.140, A:F.166, A:H.167 Hydrogen bonds: A:N.133 pi-Stacking: A:H.167 pi-Cation interactions: A:H.167 7Y3.3: 11 residues within 4Å: Chain B: F.75, W.114, N.133, N.136, Q.137, V.140, A.163, N.164, F.166, H.167, C.170 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:V.140, B:F.166, B:H.167 Hydrogen bonds: B:N.133 pi-Stacking: B:H.167, B:H.167

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: L.138, L.139, N.142 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.142

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, B.S. et al., QStatin, a Selective Inhibitor of Quorum Sensing inVibrioSpecies. MBio (2018)

Release Date

2018-01-24

Peptides

LuxR family transcriptional regulator: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

LuxR family transcriptional regulator

Related Entries With Identical Sequence