SMTL ID : 5x6m.1

Crystal Structure of SMAD5-MH1 in complex with a composite DNA sequence

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

homo-tetramer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.65, C.110, C.122, N.124, H.127 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:C.110, A:C.122, A:H.127 ZN.2: 4 residues within 4Å: Chain D: C.65, C.110, C.122, H.127 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.65, D:C.110, D:C.122, D:H.127 ZN.3: 5 residues within 4Å: Chain E: C.65, C.110, E.111, C.122, H.127 4 PLIP interactions: 4 interactions with chain E Metal complexes: E:C.65, E:C.110, E:C.122, E:H.127 ZN.4: 4 residues within 4Å: Chain H: C.65, C.110, C.122, H.127 4 PLIP interactions: 4 interactions with chain H Metal complexes: H:C.65, H:C.110, H:C.122, H:H.127

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chai, N. et al., Structural basis for the Smad5 MH1 domain to recognize different DNA sequences. Nucleic Acids Res. (2015)

Release Date

2017-03-15

Peptides

Mothers against decapentaplegic homolog 5: ADEH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

D
A

E
E

H
F

Mothers against decapentaplegic homolog 5

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