SMTL ID : 5x7l.1

Structure of TsrD from Streptomyces laurentii

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.22 Å

Oligo State

homo-dimer

Ligands

5 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.1: 5 residues within 4Å: Chain A: Y.20, W.57, L.66, F.84 Ligands: IPA.2 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:Y.20, A:W.57, A:L.66, A:F.84 Water bridges: A:Y.20 IPA.2: 7 residues within 4Å: Chain A: F.16, Y.20, M.50, D.108, F.110, H.120 Ligands: IPA.1 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:F.16, A:F.110 IPA.3: 3 residues within 4Å: Chain A: R.101, F.102, Q.132 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:R.101, A:Q.132 IPA.4: 7 residues within 4Å: Chain B: Y.20, W.57, L.66, F.84, L.106, M.124 Ligands: IPA.5 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:Y.20, B:W.57, B:L.66, B:F.84, B:L.106 Water bridges: B:Y.20 IPA.5: 6 residues within 4Å: Chain B: F.16, M.50, D.108, F.110, H.120 Ligands: IPA.4 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:F.16, B:F.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Song, Y. et al., Structure of TsrD from Streptomyces laurentii. To Be Published

Release Date

2018-03-07

Peptides

TsrD: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

TsrD