SMTL ID : 5x8s.1

Crystal Structure of the mutant Human ROR gamma Ligand Binding Domain With Ursolic acid.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

2 x 6Q5: Ursolic acid(Non-covalent)

6Q5.1: 16 residues within 4Å: Chain A: Q.26, L.27, C.60, H.63, V.101, R.104, M.105, R.107, A.108, F.117, F.118, F.128, I.137, I.140, F.141, H.219 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.27, A:H.63, A:V.101, A:M.105, A:A.108, A:F.118, A:F.128, A:F.128, A:F.141 Hydrogen bonds: A:H.219 Salt bridges: A:H.63 6Q5.2: 16 residues within 4Å: Chain B: Q.26, L.27, C.60, H.63, V.101, R.104, M.105, R.107, A.108, F.117, F.118, F.128, L.131, I.137, I.140, H.219 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:L.27, B:H.63, B:R.104, B:M.105, B:A.108, B:F.128, B:F.128, B:L.131 Hydrogen bonds: B:H.219 Water bridges: B:H.63 Salt bridges: B:H.63

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Noguchi, M. et al., Ternary complex of human ROR gamma ligand-binding domain, inverse agonist and SMRT peptide shows a unique mechanism of corepressor recruitment. Genes Cells (2017)

Release Date

2017-06-07

Peptides

Nuclear receptor ROR-gamma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Nuclear receptor ROR-gamma

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