SMTL ID : 5xe0.1

Crystal structure of EV-D68-3Dpol in complex with GTP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)

GTP.1: 13 residues within 4Å: Chain A: K.156, R.160, K.164, R.171, L.172, I.173, Y.231, T.232, G.233, Y.234, D.235, S.285, K.356 24 PLIP interactions: 24 interactions with chain A Hydrogen bonds: A:R.171, A:L.172, A:L.172, A:L.172, A:Y.231, A:G.233, A:Y.234, A:D.235, A:D.235, A:S.285 Water bridges: A:K.58, A:R.171, A:D.235, A:D.235, A:A.236, A:D.325 Salt bridges: A:R.160, A:K.164, A:K.164, A:K.164, A:R.171, A:K.356 pi-Cation interactions: A:R.171, A:R.171

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, C. et al., Crystal Structure and Thermostability Characterization of Enterovirus D68 3Dpol. J. Virol. (2017)

Release Date

2017-06-28

Peptides

Genome polyprotein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Genome polyprotein