SMTL ID : 5xg4.1

Crystal structure of uPA in complex with quercetin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

monomer

Ligands

1 x QUE: 3,5,7,3',4'-PENTAHYDROXYFLAVONE(Non-covalent)

QUE.1: 12 residues within 4Å: Chain A: H.46, H.94, D.192, S.193, Q.195, S.198, V.216, S.217, W.218, G.219, G.221 Ligands: PG6.2 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:Q.195 Hydrogen bonds: A:H.46, A:S.193, A:S.198, A:G.221

1 x PG6: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE(Non-covalent)

PG6.2: 9 residues within 4Å: Chain A: R.20, C.31, H.46, C.194, Q.195, G.196, D.197, S.198 Ligands: QUE.1 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:R.20, A:R.20, A:H.46, A:C.194, A:G.196, A:S.198, A:S.198

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xue, G. et al., A structural mechanism of flavonoids in inhibiting serine proteases. Food Funct (2017)

Release Date

2017-07-26

Peptides

Urokinase-type plasminogen activator: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
U

Urokinase-type plasminogen activator

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