SMTL ID : 5xhr.1

Crystal structure of P99 beta-lactamase in complex with a penicillin derivative MPC-1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x PXH: (2~{R},4~{S})-5,5-dimethyl-2-[(2~{S},3~{R})-3-oxidanyl-1-oxidanylidene-5-thiophen-2-yl-pentan-2-yl]-1,3-thiazolidine-4-carboxylic acid(Covalent)

PXH.1: 14 residues within 4Å: Chain A: S.68, L.123, Q.124, Y.154, N.156, V.215, Y.225, L.297, K.319, T.320, G.321, S.322, T.323, N.350 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:Y.154, A:Y.225, A:Y.225 Hydrogen bonds: A:S.68, A:Q.124, A:N.156, A:T.320, A:S.322, A:N.350 Water bridges: A:K.319, A:N.350 Salt bridges: A:K.319 pi-Stacking: A:Y.225

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pan, X. et al., Modified Penicillin Molecule with Carbapenem-Like Stereochemistry Specifically Inhibits Class C beta-Lactamases. Antimicrob. Agents Chemother. (2017)

Release Date

2017-09-27

Peptides

Beta-lactamase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-lactamase