SMTL ID : 5xhu.2 (1 other biounit)

Crystal structure of ycgT from bacillus subtilis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 32 residues within 4Å: Chain A: I.8, G.9, G.11, P.12, I.13, I.31, E.32, F.33, L.34, G.39, K.40, F.45, I.50, D.52, Q.83, R.84, V.85, A.114, C.115, G.116, G.118, T.119, L.120, M.252, G.281, D.282, L.292, I.293 Chain B: Y.321, S.322, T.323, H.324 31 PLIP interactions: 26 interactions with chain A, 5 interactions with chain B Hydrogen bonds: A:G.11, A:I.13, A:G.14, A:F.33, A:K.40, A:D.52, A:V.85, A:V.85, A:L.120, A:D.282, A:I.293, B:S.322, B:T.323, B:T.323 Water bridges: A:G.10, A:G.39, A:R.84, A:R.84, A:M.117, A:T.119, A:D.282, A:D.282, A:A.283, A:A.283, A:A.294 Salt bridges: A:K.40, A:K.40 pi-Stacking: A:F.45, A:F.45, B:Y.321, B:Y.321 FAD.2: 32 residues within 4Å: Chain A: Y.321, S.322, T.323, H.324 Chain B: I.8, G.9, G.11, P.12, I.13, I.31, E.32, F.33, L.34, G.39, K.40, F.45, I.50, D.52, Q.83, R.84, V.85, A.114, C.115, G.116, G.118, T.119, L.120, M.252, G.281, D.282, L.292, I.293 30 PLIP interactions: 26 interactions with chain B, 4 interactions with chain A Hydrogen bonds: B:G.11, B:I.13, B:G.14, B:F.33, B:K.40, B:D.52, B:V.85, B:V.85, B:L.120, B:D.282, B:I.293, A:S.322, A:T.323 Water bridges: B:G.10, B:G.39, B:R.84, B:R.84, B:M.117, B:T.119, B:D.282, B:D.282, B:A.283, B:A.283, B:A.294 Salt bridges: B:K.40, B:K.40 pi-Stacking: B:F.45, B:F.45, A:Y.321, A:Y.321

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Komori, H., Crystal structure of ycgT from bacillus subtilis. To Be Published

Release Date

2018-05-02

Peptides

Ferredoxin--NADP reductase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Ferredoxin--NADP reductase

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