SMTL ID : 5xmx.1

Co-crystal structure of Inhibitor compound in complex with human PPARdelta LBD

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x 89L: (E)-6-[2-[[[4-(furan-2-yl)phenyl]carbonyl-methyl-amino]methyl]phenoxy]-4-methyl-hex-4-enoic acid(Non-covalent)

89L.1: 20 residues within 4Å: Chain A: L.53, W.62, V.79, F.80, R.82, C.83, T.86, T.87, H.121, L.128, L.137, V.139, V.146, L.151, I.162, K.165, H.247, M.251, L.267, Y.271 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:V.79, A:V.79, A:F.80, A:F.80, A:T.87, A:L.128, A:L.137, A:V.139, A:V.146, A:V.146, A:L.151, A:I.162, A:K.165 Hydrogen bonds: A:T.87, A:T.87 Salt bridges: A:H.121, A:H.247 89L.2: 20 residues within 4Å: Chain B: L.53, V.79, F.80, R.82, C.83, Q.84, T.86, T.87, H.121, L.128, L.137, V.139, V.146, I.161, I.162, K.165, H.247, M.251, L.267, Y.271 16 PLIP interactions: 16 interactions with chain B Hydrophobic interactions: B:V.79, B:V.79, B:F.80, B:F.80, B:L.128, B:L.137, B:V.139, B:V.146, B:I.161, B:I.162, B:K.165, B:L.267 Hydrogen bonds: B:T.87, B:Y.271 Salt bridges: B:H.121, B:H.247

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lagu, B. et al., Novel highly selective peroxisome proliferator-activated receptor delta (PPAR delta) modulators with pharmacokinetic properties suitable for once-daily oral dosing. Bioorg. Med. Chem. Lett. (2017)

Release Date

2018-05-23

Peptides

Peroxisome proliferator-activated receptor delta: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor delta

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