SMTL ID : 5y1f.1

Monomeric L-threonine 3-dehydrogenase from metagenome database (NAD+ bound form)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.25 Å

Oligo State

monomer

Ligands

1 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 26 residues within 4Å: Chain A: G.26, L.28, G.29, Q.30, I.31, D.52, L.53, C.66, D.67, I.68, R.69, L.89, A.90, A.91, L.93, V.107, P.129, S.130, S.131, Y.156, K.160, Y.183, P.184, G.185, L.186, T.198 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:Y.183 Hydrogen bonds: A:Q.30, A:Q.30, A:Q.30, A:I.31, A:D.67, A:I.68, A:R.69, A:L.89, A:A.91, A:K.160, A:L.186, A:T.198 Water bridges: A:G.29, A:G.32, A:D.52, A:S.194, A:S.194, A:S.194 pi-Stacking: A:Y.183

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Motoyama, T. et al., Product Release Mechanism Associated with Structural Changes in Monomeric l-Threonine 3-Dehydrogenase. Biochemistry (2017)

Release Date

2017-11-15

Peptides

NAD dependent epimerase/dehydratase family: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

NAD dependent epimerase/dehydratase family

Related Entries With Identical Sequence