SMTL ID : 5y25.1

EGFR kinase domain mutant (T790M/L858R) with covalent ligand NS-062

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

monomer

Ligands

1 x 8LU: (2R)-N-[4-[(3-chloranyl-4-fluoranyl-phenyl)amino]-7-(3-morpholin-4-ylpropoxy)quinazolin-6-yl]-1-(2-fluoranylethanoyl)pyrrolidine-2-carboxamide(Covalent)

8LU.1: 17 residues within 4Å: Chain A: L.28, V.36, A.53, K.55, E.72, L.98, M.100, Q.101, L.102, M.103, P.104, F.105, G.106, C.107, D.110, R.151, L.154 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.28, A:L.28, A:V.36, A:A.53 Hydrogen bonds: A:L.28, A:M.103, A:C.107 Halogen bonds: A:L.98

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shindo, N. et al., Selective and reversible modification of kinase cysteines with chlorofluoroacetamides. Nat.Chem.Biol. (2019)

Release Date

2018-07-25

Peptides

Epidermal growth factor receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Epidermal growth factor receptor