SMTL ID : 5y2o.1

Structure of PPARgamma ligand binding domain-pioglitazone complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

1 x 8N6: (5S)-5-[[4-[2-(5-ethylpyridin-2-yl)ethoxy]phenyl]methyl]-1,3-thiazolidine-2,4-dione(Non-covalent)

8N6.1: 15 residues within 4Å: Chain A: I.98, F.99, C.102, S.106, H.140, I.143, Y.144, L.147, I.158, F.180, M.181, H.266, L.270, L.286, Y.290 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.143, A:I.158, A:F.180 Hydrogen bonds: A:S.106, A:Y.290, A:Y.290

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, M.A. et al., Structures of PPAR gamma complexed with lobeglitazone and pioglitazone reveal key determinants for the recognition of antidiabetic drugs. Sci Rep (2017)

Release Date

2017-12-20

Peptides

Peroxisome proliferator-activated receptor gamma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor gamma

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