SMTL ID : 5y36.1

Cryo-EM structure of SpCas9-sgRNA-DNA ternary complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

3 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 6 residues within 4Å: Chain A: H.982, H.983, D.986 Chain D: C.19, A.20 Ligands: MG.3 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.982, A:D.986 MG.2: 2 residues within 4Å: Chain A: D.839, D.861 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.839, A:D.861 MG.3: 4 residues within 4Å: Chain A: E.762, R.925 Chain D: A.20 Ligands: MG.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huai, C. et al., Structural insights into DNA cleavage activation of CRISPR-Cas9 system. Nat Commun (2017)

Release Date

2017-12-06

Peptides

CRISPR-associated endonuclease Cas9/Csn1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CRISPR-associated endonuclease Cas9/Csn1

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