SMTL ID : 5ybd.1 (1 other biounit)

X-ray structure of ETS domain of Ergp55 in complex with E74DNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.77 Å

Oligo State

monomer

Ligands

1 x DA- DC- DC- DG- DG- DA- DA- DG- DT: DNA (5'-D(P*AP*CP*CP*GP*GP*AP*AP*GP*T)-3')(Non-covalent)

DA-DC-DC-DG-DG-DA-DA-DG-DT.1: 20 residues within 4Å: Chain A: Y.53, R.58, R.61, Y.62, Y.64, K.71, K.75, R.76, Y.77, Y.79 Chain B: C.1, A.2, C.3, T.4, T.5, C.6, C.7, G.8, G.9, T.10 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:K.55, A:R.58, A:Y.62 Hydrogen bonds: A:L.4, A:W.42, A:D.54, A:D.54 Salt bridges: A:K.46, A:K.55

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sharma, R. et al., Comparative structure analysis of the ETSi domain of ERG3 and its complex with the E74 promoter DNA sequence. Acta Crystallogr F Struct Biol Commun (2018)

Release Date

2018-11-14

Peptides

Transcriptional regulator ERG: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Transcriptional regulator ERG

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