SMTL ID : 5yc1.2 (1 other biounit)

TRAF4_GPIb complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.51 Å

Oligo State

homo-trimer

Ligands

2 x ARG- LEU- ARG- ALA- ARG: GPIb peptide(Non-covalent)

ARG-LEU-ARG-ALA-ARG.1: 10 residues within 4Å: Chain A: N.66, G.67, Y.77, F.119, W.125, G.144, F.145, G.146, Y.147, P.148 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.119, A:W.125, A:F.145, A:F.145, A:Y.147 Hydrogen bonds: A:N.66, A:G.67, A:G.144, A:G.146 ARG-LEU-ARG-ALA-ARG.2: 10 residues within 4Å: Chain C: Y.77, E.117, F.119, W.125, L.143, G.144, F.145, G.146, Y.147, P.148 7 PLIP interactions: 7 interactions with chain C Hydrophobic interactions: C:F.119, C:W.125, C:F.145, C:F.145 Hydrogen bonds: C:G.144, C:G.146 Salt bridges: C:E.117

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, C.M. et al., Molecular basis for unique specificity of human TRAF4 for platelets GPIb beta and GPVI. Proc. Natl. Acad. Sci. U.S.A. (2017)

Release Date

2017-10-11

Peptides

TNF receptor-associated factor 4: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

C
F

TNF receptor-associated factor 4

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