SMTL ID : 5yd6.2 (3 other biounits)

Crystal structure of PG-bound Nurr1-LBD

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.34 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 1 residues within 4Å: Chain A: F.271 No protein-ligand interaction detected (PLIP)

1 x 8SU: (~{Z})-7-[(1~{R},5~{S})-2-oxidanylidene-5-[(~{E},3~{S})-3-oxidanyloct-1-enyl]cyclopent-3-en-1-yl]hept-5-enoic acid(Covalent)

8SU.2: 15 residues within 4Å: Chain A: E.113, S.114, F.116, L.117, E.187, R.188, R.236, C.239, T.240, L.243, I.246, I.261, L.264, F.265, T.268 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.117, A:L.243, A:I.246, A:I.261 Hydrogen bonds: A:L.117, A:R.236 Water bridges: A:S.114, A:E.118 Salt bridges: A:R.188

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rajan, S. et al., Structure of Nurr1 bound to cyclopentenone prostaglandin A2 and its mechanism of action in ameliorating dopaminergic neurodegeneration in Drosophila. To Be Published

Release Date

2019-03-27

Peptides

Nuclear receptor subfamily 4 group A member 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Nuclear receptor subfamily 4 group A member 2

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