SMTL ID : 5ydl.1

The crystal structure of the Acyl Transferase domain of SpnD complex with 2-(pent-4-yn-1-yl)malonyl

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x DUV: (2R)-2-methanoylhept-6-ynoic acid(Covalent)

DUV.1: 11 residues within 4Å: Chain A: G.118, G.119, F.172, S.200, L.201, R.225, I.226, I.229, A.230, M.293, H.298 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.172, A:F.172, A:I.226, A:I.226, A:I.229 Hydrogen bonds: A:G.119, A:L.201 Salt bridges: A:R.225, A:H.298

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, Y. et al., Structural Basis of a Broadly Selective Acyltransferase from the Polyketide Synthase of Splenocin. Angew. Chem. Int. Ed. Engl. (2018)

Release Date

2018-05-23

Peptides

PKS: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PKS

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