SMTL ID : 5yef.2 (3 other biounits)

Crystal structure of CTCF ZFs2-8-Hs5-1aE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.81 Å

Oligo State

monomer

Ligands

6 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.33, C.36, H.49, H.54 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:C.33, A:H.49, A:H.54 ZN.2: 4 residues within 4Å: Chain A: C.62, C.65, H.78, H.82 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.62, A:C.65, A:H.78, A:H.82 ZN.3: 4 residues within 4Å: Chain A: C.90, C.93, H.106, H.110 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.90, A:C.93, A:H.106, A:H.110 ZN.4: 4 residues within 4Å: Chain A: C.118, C.121, H.134, H.139 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.118, A:C.121, A:H.134, A:H.139 ZN.5: 4 residues within 4Å: Chain A: C.148, C.151, H.164, H.169 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.148, A:C.151, A:H.164, A:H.169 ZN.6: 4 residues within 4Å: Chain A: C.178, C.181, H.194, H.198 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:C.178, A:C.181, A:H.198

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yin, M. et al., Molecular mechanism of directional CTCF recognition of a diverse range of genomic sites. Cell Res. (2017)

Release Date

2017-11-29

Peptides

Transcriptional repressor CTCF: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Transcriptional repressor CTCF

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