SMTL ID : 5yiq.1

Crystal structure of AnkG LIR/LC3B complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-1-1-mer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 2 residues within 4Å: Chain A: H.86, E.102 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.86, A:E.102, A:E.102 ZN.2: 1 residues within 4Å: Chain A: Q.26 No protein-ligand interaction detected (PLIP) ZN.3: 2 residues within 4Å: Chain A: E.97, E.100 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.97, A:E.97, A:E.100, A:E.100 ZN.4: 2 residues within 4Å: Chain B: E.11, E.15 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:E.11, B:E.15

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, J. et al., Potent and specific Atg8-targeting autophagy inhibitory peptides from giant ankyrins. Nat. Chem. Biol. (2018)

Release Date

2018-05-23

Peptides

Microtubule-associated proteins 1A/1B light chain 3B: A
Ankyrin-3: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

Microtubule-associated proteins 1A/1B light chain 3B

Ankyrin-3

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