SMTL ID : 5yir.2 (2 other biounits)

Crystal Structure of AnkB LIR/GABARAP complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.75 Å

Oligo State

hetero-1-1-mer

Ligands

4 x NI: NICKEL (II) ION(Non-covalent)

NI.1: 1 residues within 4Å: Chain A: E.112 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.112, A:E.112, H2O.1, H2O.1 NI.2: 1 residues within 4Å: Chain A: H.69 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.69, H2O.1 NI.3: 2 residues within 4Å: Chain A: H.9 Chain B: E.3 4 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B, 2 Ligand-Water interactions Metal complexes: A:H.9, B:E.3, H2O.1, H2O.1 NI.4: 1 residues within 4Å: Chain A: H.98 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.98

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, J. et al., Potent and specific Atg8-targeting autophagy inhibitory peptides from giant ankyrins. Nat. Chem. Biol. (2018)

Release Date

2018-05-23

Peptides

Gamma-aminobutyric acid receptor-associated protein: A
Ankyrin-2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
G

Gamma-aminobutyric acid receptor-associated protein

Ankyrin-2

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