SMTL ID : 5yjf.2 (3 other biounits)

Co-crystal structure of Human Nicotinamide N-methyltransferase (NNMT) with small molecule analog of Nicotinamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.49 Å

Oligo State

monomer

Ligands

1 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.1: 24 residues within 4Å: Chain A: Y.31, F.35, Y.40, Y.45, G.83, S.84, G.85, T.87, Y.89, Q.90, D.105, Y.106, S.107, N.110, C.161, D.162, V.163, T.164, T.183, L.184, C.185, A.189, Y.224 Ligands: 8WO.2 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:Y.40 Hydrogen bonds: A:T.87, A:Q.90, A:Y.106, A:S.107, A:N.110, A:D.162, A:V.163, A:T.183, A:T.183 Water bridges: A:T.183 pi-Stacking: A:Y.31

1 x 8WO: 6-methoxy-1-methyl-2H-pyridine-3-carboxamide(Non-covalent)

8WO.2: 12 residues within 4Å: Chain A: Y.40, Y.44, Y.45, L.184, D.187, A.218, S.221, Y.223, Y.224, S.233, Y.262 Ligands: SAH.1 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:Y.224, A:Y.262 Hydrogen bonds: A:Y.40, A:S.221, A:S.233, A:S.233 pi-Stacking: A:Y.224

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kannt, A. et al., A small molecule inhibitor of Nicotinamide N-methyltransferase for the treatment of metabolic disorders. Sci Rep (2018)

Release Date

2018-03-21

Peptides

Nicotinamide N-methyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Nicotinamide N-methyltransferase

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