SMTL ID : 5yjk.1

Human kallikrein 7 in complex with 1,4-diazepane-7-one 1-acetamide derivative

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x 8VX: (R)-2-(6-(5-chloro-2-methoxybenzyl)-3-(2,2-dimethylhydrazono)-7-oxo-1,4-diazepan-1-yl)-N-(3-(methylsulfonyl)phenyl)acetamide(Non-covalent)

8VX.1: 18 residues within 4Å: Chain A: L.24, H.25, H.41, H.80, F.130, N.170, A.171, C.172, N.173, G.174, S.176, S.191, W.192, G.193, T.194, F.195, C.197, G.204 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:F.130, A:N.173 Hydrogen bonds: A:H.25, A:N.173, A:G.174, A:S.176, A:S.191

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 2 residues within 4Å: Chain A: R.34, Q.92 Ligand excluded by PLIP CL.3: 2 residues within 4Å: Chain A: K.43, R.71 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Murafuji, H. et al., Discovery and structure-activity relationship study of 1,3,6-trisubstituted 1,4-diazepane-7-ones as novel human kallikrein 7 inhibitors. Bioorg. Med. Chem. Lett. (2017)

Release Date

2017-12-06

Peptides

Kallikrein-7: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Kallikrein-7

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