SMTL ID : 5ymr.1 (1 other biounit)

The Crystal Structure of IseG

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x 8X3: 2-hydroxyethylsulfonic acid(Non-covalent)

8X3.1: 13 residues within 4Å: Chain A: R.167, I.170, Q.171, T.290, S.444, G.445, C.446, T.447, E.448, Y.463, Y.565, R.656, F.660 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:Q.171, A:Q.171, A:C.446, A:E.448, A:E.448 Water bridges: A:R.167 Salt bridges: A:R.167, A:R.656 8X3.4: 12 residues within 4Å: Chain B: R.167, I.170, Q.171, T.290, S.444, G.445, C.446, E.448, Y.463, Y.565, R.656, F.660 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:Q.171, B:Q.171, B:S.444, B:C.446 Water bridges: B:R.656 Salt bridges: B:R.167, B:R.656

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 10 residues within 4Å: Chain A: R.11, V.12, I.15, H.68, Q.69, L.70, R.246, E.249, E.321, C.325 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.249 GOL.3: 7 residues within 4Å: Chain A: G.364, R.365, D.366, R.396 Chain B: Q.703, F.706, L.749 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:Q.703, A:D.366, A:R.396 GOL.5: 8 residues within 4Å: Chain B: R.11, V.12, I.15, H.68, L.70, E.249, E.321, C.325 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:R.11, B:H.68, B:H.68, B:E.321 GOL.6: 8 residues within 4Å: Chain B: M.38, L.46, R.49, W.126, K.129, T.130, R.531, H.532 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:R.49, B:R.49, B:K.129, B:K.129, B:H.532

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xing, M. et al., Radical-mediated C-S bond cleavage in C2 sulfonate degradation by anaerobic bacteria. Nat Commun (2019)

Release Date

2019-03-20

Peptides

Formate acetyltransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

Formate acetyltransferase

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